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Test 9 - Lab Frequency

Overview One of the major difference between dataset, and health systems, is rate of lab samples. Here we explore lab frequency for the signal behind the important features.   Parameters (see env.sh) All parameters are included in env.sh and described in External Silent Run.

  • CMP_FEATURE_RES=... list of important features

What is actually done? For every signal relevant to an important feature, create value counts table - how many patients have n labs from this type.   Test Results Review Results, separate signal.tsv per relevant signal, are located in signals_cnt    How to read the results It is difficult to learn from the results without a reference.