Medial Code Documentation
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Public Member Functions | Data Fields
EmbedMatCreator Class Reference
Inheritance diagram for EmbedMatCreator:
SerializableObject

Public Member Functions

int prepare (MedPidRepository &rep)
 
int add_pid_lines (PidDynamicRec &pdr, MedSparseMat &smat, vector< int > &times, int use_shrink)
 
int get_pid_out_line (PidDynamicRec &pdr, int ver, int time, int use_shrink, map< int, float > &out_line)
 
int get_sparse_mat (MedPidRepository &rep, vector< pair< int, int > > &pids_times, int use_shrink, MedSparseMat &smat)
 
int get_sparse_mat (MedPidRepository &rep, MedSamples &samples, int use_outcome_time, int use_shrink, MedSparseMat &smat)
 
void prep_memebers_to_sets (MedPidRepository &rep, EmbeddingSig &es)
 
int get_shrinked_dictionary (MedSparseMat &smat, float min_p, float max_p)
 
int shrink_mat (MedSparseMat &smat, MedSparseMat &shrunk_smat)
 
int init (map< string, string > &_map)
 Virtual to init object from parsed fields.
 
void init_sids (MedSignals &sigs)
 
void init_tables (MedDictionarySections &dict)
 
int write_dict_to_file (string fname, int only_shrink)
 
string print_to_string (int verbosity)
 
int minimize ()
 
void prep_models_batches (MedPidRepository &rep, MedSamples &samples)
 
- Public Member Functions inherited from SerializableObject
virtual int version () const
 Relevant for serializations.
 
virtual string my_class_name () const
 For better handling of serializations it is highly recommended that each SerializableObject inheriting class will implement the next method.
 
virtual void serialized_fields_name (vector< string > &field_names) const
 The names of the serialized fields.
 
virtual void * new_polymorphic (string derived_name)
 for polymorphic classes that want to be able to serialize/deserialize a pointer * to the derived class given its type one needs to implement this function to return a new to the derived class given its type (as in my_type)
 
virtual void pre_serialization ()
 
virtual void post_deserialization ()
 
virtual size_t get_size ()
 Gets bytes sizes for serializations.
 
virtual size_t serialize (unsigned char *blob)
 Serialiazing object to blob memory. return number ob bytes wrote to memory.
 
virtual size_t deserialize (unsigned char *blob)
 Deserialiazing blob to object. returns number of bytes read.
 
size_t serialize_vec (vector< unsigned char > &blob)
 
size_t deserialize_vec (vector< unsigned char > &blob)
 
virtual size_t serialize (vector< unsigned char > &blob)
 
virtual size_t deserialize (vector< unsigned char > &blob)
 
virtual int read_from_file (const string &fname)
 read and deserialize model
 
virtual int write_to_file (const string &fname)
 serialize model and write to file
 
virtual int read_from_file_unsafe (const string &fname)
 read and deserialize model without checking version number - unsafe read
 
int init_from_string (string init_string)
 Init from string.
 
int init_params_from_file (string init_file)
 
int init_param_from_file (string file_str, string &param)
 
int update_from_string (const string &init_string)
 
virtual int update (map< string, string > &map)
 Virtual to update object from parsed fields.
 
virtual string object_json () const
 

Data Fields

vector< string > sigs_to_load
 
int rep_time_unit = MedTime::Date
 
int win_time_unit = MedTime::Days
 
int byear_time_unit = MedTime::Years
 
vector< EmbeddingSigembed_sigs
 

Member Function Documentation

◆ init()

int EmbedMatCreator::init ( map< string, string > &  map)
virtual

Virtual to init object from parsed fields.

Reimplemented from SerializableObject.


The documentation for this class was generated from the following files: